Package WAPT tis-osiris 2.16-2 mac

tis-osiris

2.16-2

OSIRIS is public-domain, free, and open source STR analysis software designed for clinical, forensic, and research use, and has been validated for use as an expert system for single-source samples

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Description

package : tis-osiris
name : Osiris
version : 2.16-2
categories : Utilities
maintainer : WAPT Team,Tranquil IT,Pierre Cosson,Clément Baziret
installed_size : 64640517
editor : https://www.ncbi.nlm.nih.gov/
licence : opensource_free,cpe:/a:mit:x11_license,wapt_enterprise
signature_date : 2024-10-22T11:03:24.000000
size : 33.06 Mo
locale : all
target_os : mac
impacted_process : OsirisAnalysis,TestAnalysisDirectoryLC
architecture : x64
Homepage : https://www.ncbi.nlm.nih.gov/osiris/

control


package           : tis-osiris
version           : 2.16-2
architecture      : x64
section           : base
priority          : optional
name              : Osiris
categories        : Utilities
maintainer        : WAPT Team,Tranquil IT,Pierre Cosson,Clément Baziret
description       : OSIRIS is public-domain, free, and open source STR analysis software designed for clinical, forensic, and research use, and has been validated for use as an expert system for single-source samples
depends           : 
conflicts         : 
maturity          : PROD
locale            : all
target_os         : mac
min_wapt_version  : 2.3
sources           : https://www.ncbi.nlm.nih.gov/osiris/download/
installed_size    : 64640517
impacted_process  : OsirisAnalysis,TestAnalysisDirectoryLC
description_fr    : OSIRIS est un logiciel d'analyse STR du domaine public, gratuit et open source, conçu pour une utilisation clinique, médico-légale et de recherche, et a été validé pour une utilisation en tant que système expert pour des échantillons de source unique
description_pl    : OSIRIS jest darmowym i otwartym oprogramowaniem do analizy STR, zaprojektowanym do użytku klinicznego, sądowego i badawczego, i zostało zatwierdzone do użytku jako system ekspercki dla próbek z jednego źródła
description_de    : OSIRIS ist eine kostenlose und quelloffene STR-Analysesoftware, die für klinische, forensische und Forschungszwecke entwickelt wurde und als Expertensystem für Single-Source-Proben validiert wurde
description_es    : OSIRIS es un software de análisis de STR de dominio público, gratuito y de código abierto diseñado para uso clínico, forense y de investigación, y ha sido validado para su uso como sistema experto para muestras de una sola fuente
description_pt    : O OSIRIS é um software de análise de STR de domínio público, gratuito e de fonte aberta, concebido para utilização clínica, forense e de investigação, e foi validado para utilização como um sistema especializado para amostras de fonte única
description_it    : OSIRIS è un software di analisi STR di dominio pubblico, gratuito e open source, progettato per uso clinico, forense e di ricerca, ed è stato convalidato per l'uso come sistema esperto per campioni a fonte singola
description_nl    : OSIRIS is openbare, gratis en open source STR-analysesoftware, ontworpen voor klinisch, forensisch en onderzoeksgebruik, en is gevalideerd voor gebruik als expertsysteem voor enkelvoudige monsters
description_ru    : OSIRIS - это бесплатное программное обеспечение с открытым исходным кодом для анализа STR, предназначенное для использования в клинической, судебно-медицинской и исследовательской практике, и проверенное на пригодность в качестве экспертной системы для образцов из одного источника
audit_schedule    : 
editor            : https://www.ncbi.nlm.nih.gov/
keywords          : osiris,analysis,software,clinical,forensic,research
licence           : opensource_free,cpe:/a:mit:x11_license,wapt_enterprise
homepage          : https://www.ncbi.nlm.nih.gov/osiris/
package_uuid      : ae594ab6-67cb-48be-8434-fdb85d360651
valid_from        : 
valid_until       : 
forced_install_on : 
changelog         : 
min_os_version    : 
max_os_version    : 
icon_sha256sum    : e4f4bf383e75f78a739bb3ce5616144a7499c7456f88034845ec8c4acdce3630
signer            : Tranquil IT
signer_fingerprint: 8c5127a75392be9cc9afd0dbae1222a673072c308c14d88ab246e23832e8c6bb
signature_date    : 2024-10-22T11:03:24.000000
signed_attributes : package,version,architecture,section,priority,name,categories,maintainer,description,depends,conflicts,maturity,locale,target_os,min_wapt_version,sources,installed_size,impacted_process,description_fr,description_pl,description_de,description_es,description_pt,description_it,description_nl,description_ru,audit_schedule,editor,keywords,licence,homepage,package_uuid,valid_from,valid_until,forced_install_on,changelog,min_os_version,max_os_version,icon_sha256sum,signer,signer_fingerprint,signature_date,signed_attributes
signature         : aC45cIgVE+Q5FBzmtNfywzFvlSiSGYbWgjdW/+M+I/tvSpt8wYSGHlYel6Eai86t7kIJ5jhcmq8cn5YE/lTKOZfQ2lrPSdgM1HScybuOlLSywh3hT90Jtw+3calnwlCpRA6SNRYJuc5eFqJTuJeyv61lam6Wsp7hXZ3IufFmjczhnhWiAd5qmwVEkvd494Xns/H3xuV33d5MsY5bL777QD3Fvgj75ENUpWZuLnthGcdaDzTkThAQzQbvT2H6X+4EzXpuehi9Eg4ZpDCkbgc6gbd/L0/LG+Qlc1pBdquoh5VA4wKagJzgntM3WjXY2VgQIyUimdTioQ4PFGtDzOd3Bg==

Setup.py

update_package.py


# -*- coding: utf-8 -*-
##################################################
# This file is part of WAPT Enterprise
# All right reserved, (c) Tranquil IT Systems 2024
# For more information please refer to
# https://wapt.tranquil.it/store/licences.html
##################################################
from setuphelpers import *
from setupdevhelpers import *


def update_package():
    # Declaring local variables
    package_updated = False
    proxies = get_proxies_from_wapt_console()
    if not proxies:
        proxies = get_proxies()
    arch_dict = {
        "windows-all": ".msi",
        "mac-x64": "OS X ",
    }
    bin_end = {
        "windows-all": ".msi",
        "mac-x64": ".dmg",
    }
    url = "https://www.ncbi.nlm.nih.gov/osiris/download/"


    # Getting latest version from official sources
    print("URL used is: %s" % url)
    latest_binaries = bs_find(url, "div", "class", "latest usa-width-one-half")
    for bs_search in bs_find_all(latest_binaries, "a", "href", proxies=proxies):
        if arch_dict[control.target_os + "-" + ensure_list(control.architecture)[0]] in bs_search.text:
            download_url = bs_search["href"]
            latest_bin = download_url.split("/")[-1]
            version = latest_bin.split("-")[-1].rstrip(bin_end[control.target_os + "-" + ensure_list(control.architecture)[0]])
            break

    # Downloading latest binaries
    print("Latest %s version is: %s" % (control.name, version))
    print("Download URL is: %s" % download_url)
    if not isfile(latest_bin):
        print("Downloading: %s" % latest_bin)
        wget(download_url, latest_bin, proxies=proxies)
    else:
        print("Binary is present: %s" % latest_bin)

    # Deleting outdated binaries
    remove_outdated_binaries(latest_bin)

    # Checking version from file
    if get_os_name() == "Windows" and "windows" in control.target_os.lower():
        version_from_file = get_version_from_binary(latest_bin)
        if Version(version_from_file, 2) == Version(version, 2):
            print(f"INFO: Binary file version ({version_from_file}) corresponds to online version ({version})")
        else:
            error(f"ERROR: Binary file version ({version_from_file}) do NOT corresponds to online version ({version})")

    # Changing version of the package
    if Version(version, 4) > Version(control.get_software_version(), 4):
        print("Software version updated (from: %s to: %s)" % (control.get_software_version(), Version(version)))
        package_updated = True
    else:
        print("Software version up-to-date (%s)" % Version(version))
    control.set_software_version(version)
    control.save_control_to_wapt()

    # Validating or not update-package-sources
    return package_updated

manifest.sha256


                                
4fac09431ba0badeec3e48af6a34f520a5170e7542ccc25f642691be8fb54c04 : Osiris-Mac-2.16.dmg 
38d056ab130f7bf7c481c12636a4e9959de36561d3dfcbe54c6e3571bc0c1dc3 : WAPT/certificate.crt 
6d36d7def498c8f362b8d9f009897820174e1bfc51c431650c817a4ccf543289 : WAPT/control 
e4f4bf383e75f78a739bb3ce5616144a7499c7456f88034845ec8c4acdce3630 : WAPT/icon.png 
762ab2b755b56820a9c9a20f213492b9c06d92befb57c67b6e91f716abece9a8 : luti.json 
b7895d857915cc2065c17e8fea4bcc6f536b4e79047ec381d8d3f89649cbdbbc : setup.py 
d550dbc73f95fac8274d28b46da92d26dc0d7e5c42c7aa0731266cffa821585a : update_package.py

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tis-osiris

Description

control

Setup.py

update_package.py